nf-core / nf-core/references

Pipelines to support - 1.1.0

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enhancement
Dominant language
Nextflow
Stars
23
Forks
6
Avg merge
1d 9h
Merged PRs (30d)
6

Description

Description of feature
  • atacseq
  • chipseq
  • differentialabundance
  • methylseq
  • scrnaseq

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

The issue contains only a checklist of five pipelines and names no files, tests, or entry points. Start by determining the reference requirements for atacseq, chipseq, differentialabundance, methylseq, and scrnaseq; done would mean each required pipeline is supported and its behavior is verified.

Written by the indexing model from the issue text.

Assessment

Domain
bioinformatics
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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