Custom genome
Open
Nobody has claimed this yet.
bug
- Dominant language
- Nextflow
- Stars
- 7
- Forks
- 7
- PR merge metrics
- No merged PRs in 30d
Description
Description of the bug
Hi,
Is it possible to use a custom genome for runing this workflow or are we limited to the ones you currently have built-in?
Thank you,
Susheel
Command used and terminal output
No response
Relevant files
No response
System information
No response
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue names no files, command, or test. Start by tracing how the pipeline selects its built-in genomes; the report does not define completion criteria, so confirm the intended custom-genome behavior before coding.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100