nf-core / nf-core/phageannotator
Add genus/family-level clustering to nf-core/phageannotator
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- Dominant language
- Nextflow
- Stars
- 19
- Forks
- 8
- PR merge metrics
- No merged PRs in 30d
Description
Waiting until the MCL clustering method for UHGV (https://github.com/snayfach/UHGV) is published
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue names no files, tests, or entry points. Start by checking whether the UHGV MCL clustering method has been published and review its implementation and requirements. The issue cannot define a complete done condition until that external dependency and the expected genus/family clustering behavior are specified.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 10/100