motif production for region
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 25
- Forks
- 11
- PR merge metrics
- No merged PRs in 30d
Description
Description of feature
HOMER already produces this so it should be easy. Feedback from Michael Zhang.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the pipeline's existing region-processing entry points and how HOMER produces motifs, since the issue names no files, tests, or commands. Determine the expected motif output for a region and how it should fit into the Nascent workflow; the issue is complete only when that behavior is implemented and validated against the project's existing pipeline checks.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100