Consider tsshmm
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 25
- Forks
- 11
- PR merge metrics
- No merged PRs in 30d
Description
Description of feature
https://github.com/coregenomics/tsshmm @omsai any thoughts on using this over groHMM? I also noticed there's a fork of groHMM that I'm considering switching to.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Review the tsshmm repository linked in the issue and compare it with groHMM, including the mentioned groHMM fork. Establish which option the Nascent Transcription Processing Pipeline should use and document the decision and required integration scope.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 15/100