nf-core / nf-core/multiplesequencealign
Add Re-Align-P
Open
Nobody has claimed this yet.
enhancement
not urgent
- Dominant language
- Nextflow
- Stars
- 41
- Forks
- 14
- PR merge metrics
- No merged PRs in 30d
Description
Description of feature
Add Re-Align-P, potentially as a post-processing step
https://academic.oup.com/bioinformatics/article/41/8/btaf421/8213638?login=false
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Read the linked Re-Align-P paper first and determine how it could fit as a post-processing step in the multiple-sequence-alignment pipeline. Define the integration point, inputs, outputs, and acceptance criteria before implementation; the issue names no files, tests, or existing entry point.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100