nf-core / nf-core/multiplesequencealign
Add validation for combination of tools (tree and align)
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 41
- Forks
- 14
- PR merge metrics
- No merged PRs in 30d
Description
Description of feature
Add a check to see which are the invalid combination of tools, e.g. providing a guidetree to a tool that does not take a guidetree as input
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the validation and tool-selection entry points for tree, align, and guidetree. Review how each tool declares its inputs, then define and test rejection of invalid combinations, including supplying a guidetree to a tool that does not accept one.
Written by the indexing model from the issue text.
Assessment
- Domain
- tooling
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100