Fix sentieon dedup metrics now that multiqc can handle it
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Description
Fairly sure we don't need this anymore, I think that multiqc can do this now.
Originally posted by @SPPearce in https://github.com/nf-core/modules/pull/8923#discussion_r2287537715
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with PR #8923 and its linked discussion, since no file or test is named. Establish which Sentieon dedup metric handling remains and what MultiQC already covers; done means the obsolete handling is no longer needed, with relevant checks passing.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Refactor
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100