nf-core / nf-core/modules

[FEATURE] use nodefaults for all conda environments

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Description

Is your feature request related to a problem? Please describe

With the conda licensing changes, it might make sense to explicitly say we aren't using defaults for the modules.

Related to https://github.com/nf-core/modules/issues/5829

Describe the solution you'd like

No response

Describe alternatives you've considered

No response

Additional context

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Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading the related nf-core/modules issue #5829 and then locate where conda environments are defined in this repository. The issue provides no file or test names; done means applying the nodefaults setting consistently to all conda environments.

Written by the indexing model from the issue text.

Assessment

Domain
tooling
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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