nf-core / nf-core/modules

[BATCH] Module updates that do not require pipeline updates

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Description

Collection of updates that can be applied to multiple / all modules but do not require pipeline updates. For more severe changes check https://github.com/nf-core/modules/issues/8238

[!NOTE]
I opened this new meta issue as GitHub will stop supporting tasklists and goes for subissues instead. The original issue with all batch updates is https://github.com/nf-core/modules/issues/5828

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading issues 8238 and 5828 to recover the batch-update scope and identify the relevant module targets or subissues. The issue is done when the agreed updates are applied across the modules without pipeline updates; no files or tests are named, so the validation path must be established first.

Written by the indexing model from the issue text.

Assessment

Domain
devops
Issue type
Refactor
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
15/100

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