nf-core / nf-core/modules

update module: rsem/calculateexpression and rsem/preparereference

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#8,108 2 comments 0 reactions 0 assignees View on GitHub

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update module
Dominant language
Nextflow
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Forks
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Avg merge
1d 6h
Merged PRs (30d)
153

Description

Is there an existing module for this?
  • I have searched for the existing module
Is there an open PR for this?
  • I have searched for existing PRs
Is there an open issue for this?
  • I have searched for existing issues
Are you going to work on this?
  • If I'm planning to work on this module, I added myself to the Assignees to facilitate tracking who is working on the module

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Locate the existing module definitions for rsem/calculateexpression and rsem/preparereference and read their current implementation and metadata. The issue does not specify what should change, so first determine the intended update and any corresponding repository conventions or checks; the work is done when both named modules meet that requirement.

Written by the indexing model from the issue text.

Assessment

Domain
bioinformatics
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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