nf-core / nf-core/modules

Address limitations of using nf-test sharding

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#7,018 1 comment 0 reactions 0 assignees View on GitHub

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enhancement
Dominant language
Nextflow
Stars
429
Forks
1.1k
Avg merge
1d 6h
Merged PRs (30d)
153

Description

List post #6286 that aren't breaking but would be nice to have

### Tasks
- [ ] Functioning Test Report
- [ ] Smart number of shards
- [ ] Avoid failing conda tests
- [ ] Add branch checks for CI jobs

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading post #6286 and the four unchecked tasks: test reporting, shard sizing, conda-test failures, and branch checks for CI jobs. Done means the relevant nf-test sharding limitations are addressed without breaking the existing workflow, with each task demonstrably functioning.

Written by the indexing model from the issue text.

Assessment

Domain
ci-cd, testing
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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