Update test checksums in seqkit modules to allow for upgrades
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Description
Have you checked the docs?
Description of the bug
Some seqkit modules have checksum checks on versions.yml.
This along with other test checksum failures makes it difficult to update the seqkit version across all modules
https://github.com/nf-core/modules/pull/3925
For the time being only some of the modules are being kept up-to-date with new seqkit releases, e.g.
https://github.com/nf-core/modules/pull/5463
See also related issue
https://github.com/nf-core/modules/issues/4249
Command used and terminal output
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Relevant files
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System information
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Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by inspecting the seqkit modules and their checksum checks for versions.yml. Compare the expected checksums with the changes discussed in PRs 3925 and 5463 and the related issue 4249, then update the affected checks and verify that the relevant module tests pass.
Written by the indexing model from the issue text.
Assessment
- Domain
- testing-qa
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100