[FEATURE] Use Groovy to unpack compressed tar.gz files
Open
@adamrtalbot is already working on this.
Since Oct 16, 2023.
enhancement
- Dominant language
- Nextflow
- Stars
- 429
- Forks
- 1.1k
- Avg merge
- 1d 6h
- Merged PRs (30d)
- 153
Description
Is your feature request related to a problem? Please describe
We sometimes need to run UNTAR, GZIP, GUNZIP etc just to unpack a file before running a tool. Let's use Native groovy with nf-test to do this.
Describe the solution you'd like
Grooooooovy wizardry.
Describe alternatives you've considered
Importing the module everywhere.
Additional context
No response
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Assessment
This issue has not been assessed yet.