nf-core / nf-core/modules

update module: cellranger

Open Beginner friendly
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update module
Dominant language
Nextflow
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Forks
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Avg merge
1d 6h
Merged PRs (30d)
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Description

Specifically, update the cellranger image to use cellranger V10.1.0. See the README.md

Is there an existing module for this?
  • I have searched for the existing module
Is there an open PR for this?
  • I have searched for existing PRs
Is there an open issue for this?
  • I have searched for existing issues
Are you going to work on this?
  • If I'm planning to work on this module, I added myself to the Assignees to facilitate tracking who is working on the module

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the existing cellranger module and its README.md at modules/nf-core/cellranger/README.md. Check how the current image version is specified, update it to cellranger V10.1.0, and verify that the module documentation reflects the requested version.

Written by the indexing model from the issue text.

Assessment

Domain
bioinformatics
Issue type
Feature
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Quiet
Clarity
Clearly specified
Newbie friendliness
72/100

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