nf-core / nf-core/modules

new module: refinegems

Open
#11,934 0 comments 1 reaction 2 assignees View on GitHub

@brovolia is already working on this.

Since Jun 9, 2026.

  • #11935 by @copilot-swe-agent — open
new module
Dominant language
Nextflow
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Merged PRs (30d)
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Description

Is there an existing module for this?
  • I have searched for the existing module
Is there an open PR for this?
  • I have searched for existing PRs
Is there an open issue for this?
  • I have searched for existing issues
Further Information

The module will be based on this tool https://github.com/draeger-lab/refinegems

Are you going to work on this?
  • If I'm planning to work on this module, I added myself to the Assignees to facilitate tracking who is working on the module
Software requirements (conda)
---
# yaml-language-server: $schema=https://raw.githubusercontent.com/nf-core/modules/master/modules/environment-schema.json
channels:
  - conda-forge
  - bioconda
dependencies:
  - bioconda::ENTER_PACKAGE_NAME=0.1.23

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

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