new module: hite
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@chriswyatt1 is already working on this.
Since Apr 20, 2026.
new module
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Description
Is there an existing module for this?
- I have searched for the existing module
Is there an open PR for this?
- I have searched for existing PRs
Is there an open issue for this?
- I have searched for existing issues
Further Information
High speed TE annotator:
https://github.com/CSU-KangHu/HiTE
Genomeqc has this as a local module. We may as well upgrade this to a proper nf-core module. Using this as a template
https://github.com/nf-core/genomeqc/blob/dev/modules/local/hite/main.nf
Are you going to work on this?
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Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Assessment
This issue has not been assessed yet.