Add sample methylation summary for the Methyldackel workflow
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enhancement
- Dominant language
- Nextflow
- Stars
- 198
- Forks
- 181
- Avg merge
- 6d 17h
- Merged PRs (30d)
- 1
Description
Description of feature
Dear all, would it be possible to have a summary table with all key methylation stats per sample? Ideally it would be nice to have something in MultiQC but I know the tool is not supported so it would be nice to have at least a table with this infos. Thanks!
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
No file or test is named. Start by locating the Methyldackel workflow outputs and identifying the per-sample methylation statistics they provide; compare these with the requested summary table and consider the MultiQC limitation. Done means producing a clear table containing the key methylation statistics for each sample.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Quiet
- Clarity
- Needs clarification
- Newbie friendliness
- 45/100