Fetching from the European Genome-Phenome Archive
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 202
- Forks
- 93
- Avg merge
- 1d 18m
- Merged PRs (30d)
- 15
Description
Description of feature
I would love to have an integration with the European Genome-Phenome Archive! :)
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing fetchngs's existing integrations for public databases and its pipeline entry points. Determine what European Genome-Phenome Archive metadata and raw FastQ access must support, then define the integration's completion criteria before implementation; this issue names no files or tests.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100