nf-core / nf-core/fetchngs

Add xsra support

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enhancement
Dominant language
Nextflow
Stars
202
Forks
93
Avg merge
1d 18m
Merged PRs (30d)
15

Description

Description of feature

https://github.com/arcInstitute/xsra

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading the xsra project linked in the issue and then inspect the fetchngs workflow entry points that handle database downloads. Determine how xsra should fit the existing fetching flow and what inputs and outputs it must support. Done means xsra is integrated into fetchngs with documented behavior and validation that the expected raw files can be fetched.

Written by the indexing model from the issue text.

Assessment

Domain
data-engineering
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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