Add support for more aligners
Open
Nobody has claimed this yet.
enhancement
good first issue
- Dominant language
- Nextflow
- Stars
- 29
- Forks
- 16
- Avg merge
- 5d 36m
- Merged PRs (30d)
- 1
Description
Description of feature
If and when possible, can you add support for other aligners next to bwa?
Thanks
M
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue names no files, tests, or target aligners. First inspect the existing bwa integration and identify the pipeline entry point, then confirm which additional aligners are in scope with maintainers. Done means the agreed aligners are supported and the relevant pipeline checks pass.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100