nf-core / nf-core/eager

DSL2: Add test profile that forces ALL the possible merging steps for FastQ and BAM inputs, to ensure no file name collisions happen.

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#986 1 comment 0 reactions 1 assignee View on GitHub

@ilight1542 is already working on this.

Since Mar 24, 2025.

DSL2
Dominant language
Nextflow
Stars
215
Forks
91
Avg merge
5m
Merged PRs (30d)
1

Description

Merges happen at these levels:

  • pairness (BAMs are always SE, so that should be fine.)
  • lane
  • udg
  • library_id

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First steps

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  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

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