DSL2 - Genotyping on unmerged libraries
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@ilight1542 is already working on this.
Since Mar 26, 2025.
DSL2
enhancement
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Description
Aida mentioned that the default behavior of always collapsing libraries within a single sample for input into genotyping may be inappropriate when mutliple libs have different UDG treatment status/damage models, etc.
Modifying necessary for the input channel generation for genotyping to be able to either get unmerged or merged data.
Unmerged data also necessitates changes to the prefix and tags for all processess where previously only unique sampleIDs would be sufficient.
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