Integrate Chronos for screen data
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Nextflow
- Stars
- 63
- Forks
- 39
- PR merge metrics
- No merged PRs in 30d
Description
Description of feature
Chronos is an enticing addition to this pipeline given the ever-expanding DepMap project which also uses it.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the pipeline's screening workflow and the Chronos project linked in the issue, then compare their expected inputs and outputs with the DepMap use case. No files or tests are named, so identify the relevant workflow entry points and validation coverage first. Done means Chronos is integrated for screen data with documented, reproducible validation.
Written by the indexing model from the issue text.
Assessment
- Domain
- data
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100