nf-core / nf-core/clipseq

DSL2 port?

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enhancement
Dominant language
Nextflow
Stars
26
Forks
43
PR merge metrics
No merged PRs in 30d

Description

Great work everyone!

I think this is a DSL1 pipeline? Any plans / ideas to port it to DSL2? (I may be wrong here or misunderstood something, but if someone is already working on this please let me know).

Thanks,
Gregor

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the existing pipeline to confirm whether it uses DSL1 and consult the project's guidance for a DSL2 migration. Define the migration scope and acceptance criteria before implementing; the issue does not identify files, tests, or a specific behavior that marks the work as done.

Written by the indexing model from the issue text.

Assessment

Domain
bioinformatics
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Active
Clarity
Needs clarification
Newbie friendliness
25/100

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