nf-core / nf-core/clipseq

Address complicated annotation generation

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#119 0 comments 0 reactions 3 assignees View on GitHub

@kkuret is already working on this.

Since Mar 24, 2025.

enhancement
Dominant language
Nextflow
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26
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43
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No merged PRs in 30d

Description

The processes for filtering and creating suitable annotation are quite complex, producing a lot of files that are hard to understand and easy to get mixed up.
Can we:
a) reduce the complexity of the processing to only that which is strictly necessary
b) bullet-proof any code to throw errors in case of strangeness
c) fully document the resulting remaining processes

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