Latest version still generated MACS2, not MACS3

Description of the bug

Hi,

I want to ask why I use latesest version, but my results is still macs2, not macs3.

Here is my command line:

nextflow run nf-core/atacseq -resume -c nextflow.config --input /project/sli68423_1316/users/yang/workspace/nanome/related_proje
ct/aml_nanopore/atac/00samplesheet_atac.csv --outdir results_mll_atac_hg38 -profile singularity --genome GRCh38 --read_length 50 -
-narrow_peak

Here is output directory:

ls bwa/merged_library/
ataqv                           D3_REP1.mLb.clN.sorted.bam      D6_REP1.mLb.clN.sorted.bam      deeptools
bigwig                          D3_REP1.mLb.clN.sorted.bam.bai  D6_REP1.mLb.clN.sorted.bam.bai  macs2
D1_REP1.mLb.clN.sorted.bam      D4_REP1.mLb.clN.sorted.bam      D7_REP1.mLb.clN.sorted.bam      picard_metrics
D1_REP1.mLb.clN.sorted.bam.bai  D4_REP1.mLb.clN.sorted.bam.bai  D7_REP1.mLb.clN.sorted.bam.bai  samtools_stats
D2_REP1.mLb.clN.sorted.bam      D5_REP1.mLb.clN.sorted.bam      D8_REP1.mLb.clN.sorted.bam
D2_REP1.mLb.clN.sorted.bam.bai  D5_REP1.mLb.clN.sorted.bam.bai  D8_REP1.mLb.clN.sorted.bam.bai

Command used and terminal output

nextflow run nf-core/atacseq -resume -c nextflow.config --input /project/sli68423_1316/users/yang/workspace/nanome/related_proje
ct/aml_nanopore/atac/00samplesheet_atac.csv --outdir results_mll_atac_hg38 -profile singularity --genome GRCh38 --read_length 50 -
-narrow_peak

Relevant files

No response

System information

No response

Start by reproducing the reported command with the supplied configuration, profile, genome, and samplesheet, then inspect the bwa/merged_library/macs2 output. Trace which peak-calling component the workflow invokes and compare that behavior with the requested latest version; done means identifying the cause and confirming the expected MACS version is used.