Biotype analysis using featureCounts
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enhancement
- Dominant language
- Nextflow
- Stars
- 229
- Forks
- 141
- Avg merge
- 13h 41m
- Merged PRs (30d)
- 1
Description
It would be great to include biotype analysis using featureCounts in this pipeline.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with the ATAC-seq pipeline and determine where featureCounts-based biotype analysis belongs and what output it should produce. Define the expected analysis and completion criteria before implementing and validating the feature.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100