navinlabcode / navinlabcode/CellTrek
Normalization methods
Open
Nobody has claimed this yet.
- Dominant language
- R
- Stars
- 135
- Forks
- 23
- PR merge metrics
- No merged PRs in 30d
Description
Dear all
@williamhsy @Puriney @WandeRum @MinBio @nnavinlab
Thanks for developing this useful tool!
I just have a question about the normalization methods for sc and st data.
Is it okay to have a log-normalized sc data and SCT-normalized st data?
Best regards
Song
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
No file, test, or entry point is named. First clarify the supported normalization combinations for sc and st data, then locate the relevant user documentation and record the guidance there. Done means the compatibility question is answered clearly for future users.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- r
- Domain
- data
- Issue type
- Documentation
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 15/100