navinlabcode / navinlabcode/CellTrek
Error while running CellTrek:celltrek function
Nobody has claimed this yet.
- Dominant language
- R
- Stars
- 135
- Forks
- 23
- PR merge metrics
- No merged PRs in 30d
Description
Hi,
while running the cell trek package, especially at the CellTrek::celltrek function, I'm getting the following error (shown in the [screenshot)] and attached my R script screenshot too along with SessionInfo. It would be a great help to know how to fix this.


Best Regards,
Pratap,
Bioinformatician,
NCCS,
Singapore
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the failure at the CellTrek::celltrek entry point using the attached R script and SessionInfo. Inspect the error shown in the screenshots and trace it to the relevant package behavior; done means identifying the cause and confirming a fix with the reported workflow.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- r
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100