martinpacesa / martinpacesa/BindCraft

add this Dockerfile

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Dominant language
Python
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Forks
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Description

FROM nvidia/cuda:13.3.0-cudnn-devel-ubuntu24.04

RUN apt update && apt install -y git curl wget gfortran

RUN curl -O https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh
RUN git clone https://github.com/martinpacesa/BindCraft /BindCraft

RUN bash -c 'echo -e "\nyes\n\n\yesn" | bash ./Miniconda3-latest-Linux-x86_64.sh'
RUN bash -c 'echo > /root/.bashrc; /root/miniconda3/bin/conda init'

RUN /root/miniconda3/bin/conda tos accept --override-channels --channel https://repo.anaconda.com/pkgs/main
RUN /root/miniconda3/bin/conda tos accept --override-channels --channel https://repo.anaconda.com/pkgs/r
WORKDIR /BindCraft

RUN bash -c '(echo source ~/.bashrc; sed 1d ./install_bindcraft.sh ) > ./install_bindcraft2.sh'

RUN bash ./install_bindcraft2.sh --cuda 13.2
RUN echo "conda activate BindCraft" >> ~/.bashrc

or dont but i am leaving this here for the next poor soul that tries to install this

run this with docker run -v $PWD:/BindCraft (pwd needs to be this repo)

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the repository's install_bindcraft.sh and the supplied Dockerfile commands, then check the repository root for the expected location and naming convention for container files. Add the Docker setup if it fits the project structure and verify that it builds and supports the documented docker run -v $PWD:/BindCraft workflow.

Written by the indexing model from the issue text.

Assessment

Tech stack
anaconda, docker, python
Domain
devops
Issue type
Feature
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Quiet
Clarity
Mostly clear
Newbie friendliness
65/100

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