[hyperdebug] `apply_default_configuration` skips DFT apply workaround
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Description
### Description
Provisioning programs calling the `transport.apply_default_configuration()` function directly run into when running in `test_unlocked` life cycle states.

As shown in the capture, the reset signal is toggled when both UART pins are not low. How should we handle this? Should the following hyperdebug command be aware of the required DFT workaround?
https://github.com/lowRISC/opentitan/blob/015faab7d828252ed21196b6947bffc646b4d0fc/sw/host/opentitanlib/src/transport/hyperdebug/mod.rs#L510-L512
CC: @timothytrippel @cfrantz
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