lmcinnes / lmcinnes/umap

Lackluster clustering performance

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Description

Hi! I tried following the clustering guide, but comparing tsne vs umap and k-means vs hdbscan, but in the end umap and hdbscan had some pretty awful performances, can you help me understand why?
The dataset used is [Imagenette](https://github.com/fastai/imagenette) (an easier subset of imagenet with only 10 classes) and I passed it through a pretrained resnet to get the features.

Link to the [colab](https://colab.research.google.com/drive/1viJLLGDBsEB1sAlXW8NPYjjXzgjx2lsk?usp=sharing)
Thanks in advance for the help

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Research direction

Start by running the linked Colab and reviewing the clustering guide, using the Imagenette features produced from the pretrained ResNet as the stated setup. Compare the reported t-SNE versus UMAP and k-means versus HDBSCAN results, then document a reproducible explanation for the performance difference or identify a confirmed issue.

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Assessment

Tech stack
python
Domain
machine-learning
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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