lmcinnes / lmcinnes/umap

Crash when running with larger dataset

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Dominant language
Python
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Description

Hello,

I am having some trouble running umap with a large data-set (0.75m with 75 columns) on 0.4.1
After running around 10-15mins, the python session just crash.

I was able to run the exact same things on a slightly bigger data-set (2.5m with 75 columns) on 0.3.10.

Cheers,

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Research direction

No files, tests, or entry points are named. Start by reproducing the crash with the reported dataset sizes on UMAP 0.4.1 and 0.3.10, recording the Python environment and any crash output. Done means identifying the regression or failure cause and verifying that the large-dataset run no longer crashes.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
machine-learning, performance
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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