llrs / llrs/experDesign

Add image of what confounding is for batch effects

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Dominant language
R
Stars
10
Forks
1
PR merge metrics
No merged PRs in 30d

Description

Maybe reference figure 1 of [this paper](https://www.biorxiv.org/content/10.1101/025528v1), or the equivalent [S1 of the published version](https://doi.org/10.1093/biostatistics/kxx053)

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by comparing Figure 1 in the linked bioRxiv paper with Supplementary Figure S1 in the published version. Done means the repository includes an image that clearly explains confounding for batch effects and is referenced in the relevant documentation location, which is not specified in the issue.

Written by the indexing model from the issue text.

Assessment

Domain
documentation
Issue type
Documentation
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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