Use case: classificate gene sets
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- R
- Stars
- 14
- Forks
- 1
- PR merge metrics
- No merged PRs in 30d
Description
Add an example here or in the blog about how to use it to classify GeneSets which are similar
Suggestion:
1. Via a dendrogram find those that are related
2. Parsing of the names of the gene sets to find the right label
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Review the package documentation and blog entry points to find where an example for classifying similar GeneSets belongs. Define how the dendrogram and gene-set name parsing should lead to labels, then add an example that demonstrates the workflow and verifies that readers can reproduce it.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- r
- Domain
- bioinformatics, documentation
- Issue type
- Documentation
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100