llrs / llrs/BioCor

To evaluate enrichment

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question
Dominant language
R
Stars
14
Forks
1
PR merge metrics
No merged PRs in 30d

Description

Explore the idea that the less similar an enrichment is, the better the input is (either the gene sets) or the genes for the enrichment.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No files, tests, or entry points are identified in the issue. First review how BioCor currently represents gene sets and calculates enrichment, then define whether lower similarity should evaluate the input gene sets, the genes, or both, along with a measurable completion criterion.

Written by the indexing model from the issue text.

Assessment

Tech stack
r
Domain
bioinformatics
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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