llnl / llnl/FAST

How do you use this tool with my own files?

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Dominant language
Python
Stars
92
Forks
31
PR merge metrics
No merged PRs in 30d

Description

Hi,

It is really not clear to me how this tool can be used to evaluate my own data. For ex, If I want to screen ligands (in mol2 or smiles) for the Muscarinic M3 receptor (in pdb: 4U15), How do I prepare these files to be compatible with your tool?

Thanks for your help

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No file, test, or entry point is named in the issue. Start by locating the repository's existing usage documentation and input-handling entry points, then document how ligand files in mol2 or SMILES format and the 4U15 PDB receptor should be prepared; done means a user can follow the instructions to evaluate their own data.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
documentation
Issue type
Documentation
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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