klmr / klmr/thesis

PCA of mean GO term codon usage

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Description

How did you perform this? "PCA of mean GO term codon usage" I was reading your thesis saw in this chapter

```
Implications of codon–anticodon interaction on the regulation of translation
```

Can i use for differential analysed genes on which I ran gene ontology now I have the ontology. can you show me a dummy example how to perform this.

I have done PCA on expression and sample wise but not like this. I would like to do the same.

Any suggestion or help would be highly appreciated

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Research direction

Start by locating the thesis chapter titled "Implications of codon–anticodon interaction on the regulation of translation" and identify how the PCA of mean GO term codon usage was performed. The issue does not name a file, test, or defined documentation change; done would require agreeing on and documenting a reproducible dummy example.

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Assessment

Domain
documentation
Issue type
Documentation
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
10/100

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