Optional pre-processing
Open
- Dominant language
- Python
- Stars
- 7
- Forks
- 6
- PR merge metrics
- No merged PRs in 30d
Description
Optionally perform pre-processing for workflow if not already run.
- [ ] brain extraction (Synthseg)
- [ ] Freesurfer / Fastsurfer
- [ ] ~DWI Preprocessing (Snakedwi)~
Contributor guide
No contributing guide indexed for this repository
Research direction
No files, tests, or entry points are named. Start by locating the workflow entry point and existing preprocessing handling, then review how the listed Synthseg and Freesurfer/Fastsurfer steps could be represented as optional work; completion should cover the requested steps only when preprocessing has not already run.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100