khanlab / khanlab/diffparc-surf
Minimal eddy-current correction
- Dominant language
- Python
- Stars
- 1
- Forks
- 2
- PR merge metrics
- No merged PRs in 30d
Description
With FSL Eddy disabled, there is only the rudimentary motion-correction applied. Will need to improve this if working with e.g. high b-value datasets, or just to improve distortions.
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by locating the Snakebids app's DWI-processing entry point and the current motion-correction path used when FSL Eddy is disabled. Review how high b-value datasets and distortion correction are currently handled, then define a measurable correction target and validation dataset before changing behavior. Done should mean improved eddy-current correction and reduced distortions for the stated use cases.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100