khanlab / khanlab/diffparc-surf

Minimal eddy-current correction

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Dominant language
Python
Stars
1
Forks
2
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Description

With FSL Eddy disabled, there is only the rudimentary motion-correction applied. Will need to improve this if working with e.g. high b-value datasets, or just to improve distortions.

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by locating the Snakebids app's DWI-processing entry point and the current motion-correction path used when FSL Eddy is disabled. Review how high b-value datasets and distortion correction are currently handled, then define a measurable correction target and validation dataset before changing behavior. Done should mean improved eddy-current correction and reduced distortions for the stated use cases.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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