khanlab / khanlab/SPIMprep

run bids-validator as a final step

Open
#25 0 comments 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
6
Forks
3
PR merge metrics
No merged PRs in 30d

Description

Now that it is bids-compliant, would be nice to add this as a final step.

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by locating the Snakemake workflow entry point and identifying how its existing final steps are defined. Check how bids-validator should be invoked and what output or failure condition marks the workflow as complete. Done means the validator runs after preprocessing and its result is visible to the workflow user.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics, build-system
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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