Improve dataset/source info and remove duplication
- Dominant language
- Java
- Stars
- 1
- Forks
- 4
- PR merge metrics
- No merged PRs in 30d
Description
- There are 2 _FlyBase Controlled Vocabulary dataset_ with no entities associated. Deleted it from datasets.xml?
- _GO_ and _The Gene Ontology_ are probably the same. To merge those, add in project.xml the properties dataset (and datasource) and set the same of the values in datasets.xml. For example _The Gene Ontology_ (_The Gene Ontology Consortium_)
- _GO Annotation data set_ and _GO Annotation for Drosophila melanogaster_ are probably the same. In this converter dataset/source are hardcoded. The only way to merge is using the same values in datasets.xml. Use _GO Annotation data set_ and _GO Annotation_ in the datasets.xml.
- _Human gene identifiers_ and _NCBI Entrez Gene identifiers_ are probably the same.
In this converter dataset/source are hardcoded. The only way to merge is using the same values
Use _NCBI Entrez Gene identifiers_ and _NCBI_ in the datasets.xml
- _NCBI PubMed to gene mapping_ and _PubMed to gene mapping_ are probably the same. In this converter dataset/source are hardcoded. The only way to merge is using the same values
Use _PubMed to gene mapping_ and _NCBI_ in the datasets.xml
- _Sequence Ontology_ and _The Sequence Ontology_ are probablye the same. To merge those, add in project.xml the properties dataset and datasource and set the same of the values in datasets.xml
- _UniProt data set_ and _Uniprot data set_ are probalby the same. Case sensitive, use Uni**P**rot data set and Uni**P**rot in the datasets.xml
- _WormBase gene identifiers_ and _Wormbase gene identifiers_ are probaby the same. Case sensitive, use _Worm**B**ase gene identifiers_ and _Worm**B**ase_ in the datasets.xml
- _miRBase Targets_ and _microRNA Targets_ are probably the same. To merge those, set in the project.xml gff3.dataSetTitle and gff3.dataSourceName to be the same of the values in datasets.xml
Contributor guide
No contributing guide indexed for this repository
Assessment
This issue has not been assessed yet.