intermine / intermine/bluegenes

Tool wishlist: Reactome

Open
#266 2 comments 0 reactions 0 assignees View on GitHub
Tool API
Dominant language
Clojure
Stars
75
Forks
59
PR merge metrics
No merged PRs in 30d

Description

Here are the docs:

https://reactome.org/dev/pathways-overview
: http://reactome.org/PathwayBrowser/#/R-HSA-168256&DTAB=AN&ANALYSIS=MjAxNzA4MDExNzI5MzdfMjA3&RESOURCE=UNIPROT

Contributor guide

Open the contributing guide

Research direction

Start by reading the linked Reactome pathways overview and PathwayBrowser example to understand the requested tool. The issue does not name Bluegenes files, entry points, or tests, so first identify where external genomic tools are integrated. Done would require a defined Reactome integration scope and a way to verify it works.

Written by the indexing model from the issue text.

Assessment

Tech stack
clojure
Domain
data
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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