intermine / intermine/InterMineR
convertToGeneAnswers should accept list names
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- R
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Description
`convertToGeneAnswers` constitutes a wrapper function for converting the results of the doEnrichment function to a GeneAnswers-class object.
To run this function, one must pass a data.frame containing the gene identifiers that were enriched on as the `geneInput` argument.
Given that enrichment can be run using either a list of ids or an InterMine list name, it would make sense if `convertToGeneAnswers` would accept a list name for `geneInput` as well - otherwise we have to run a query to fetch the list contents client side, even though we didn't need to do this for the enrichment in the previous step.
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