imagej / imagej/tutorials

Include Maven installation of ImageJ and Fiji artifacts in postBuild for binder

Open
#70 6 comments 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

Dominant language
Jupyter Notebook
Stars
200
Forks
117
PR merge metrics
No merged PRs in 30d

Description

Maybe we can run `mvn` (or `jgo`) in a `binder/postBuild` file to pre-install the Fiji and ImageJ Maven artifacts (at the versions used in the notebooks) at the time of building the binder image, so that using the notebooks on mybinder.org requires less waiting.

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the binder/postBuild entry point and inspect the notebooks to identify the Fiji and ImageJ artifact versions they use. Check whether mvn or jgo is already available during Binder builds, then verify that a Binder image pre-installs those artifacts and that notebook startup no longer waits for them.

Written by the indexing model from the issue text.

Assessment

Tech stack
java, jupyter-notebook
Domain
build-system, devops
Issue type
Feature
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.