imagej / imagej/imagej2

FFT line intensity profile shows units in [nm] rather than [1/nm]

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Dominant language
Java
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Description

When taking intensity profile in one dimension after extracting FFT from HRTEM image (DM3 file), I get the scale in [nm] rather than [1/nm]. Firstly, it doesn't make sense to show the same units in both real and reciprocal space. Secondly, any suggestions on how to convert [nm] to [1/nm]? haven't found an efficient way to do so because the number of pixels from the sub region that I choose in my HRTEM image and the number of pixels in the FFT image is not necessarily correlated.

Thanks.

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Research direction

The issue names no source files, tests, or entry points. Start by reproducing the FFT intensity-profile behavior with a DM3 HRTEM image and inspect how spatial calibration is carried into reciprocal-space profiles. Done means the profile uses reciprocal-length units such as [1/nm] and handles the selected subregion's pixel dimensions correctly.

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Assessment

Tech stack
java
Domain
computer-vision
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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