imagej / imagej/imagej2

ImageJ does not detect frame interval

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#109 2 comments 0 reactions 0 assignees View on GitHub
Dominant language
Java
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Description

I post it here but I really don't know where this bug should go wether scifio, fiji or imagej.

When opening OME Tiff, frame interval (dt) is not detected (all other metadata are correctly detected). Looking at the OME XML inside the tiff file I confirm that TimeIncrement is correctly set.

This issue happens with all my images. An example can be found here : https://arwen.hadim.fr/public.php?service=files&t=cb2055aa5813b32748d5e22013a7d1b7

I am using an up to date version of Fiji.

Contributor guide

No contributing guide indexed for this repository

Research direction

No repository file or test is identified in the issue. Start by reproducing the problem in Fiji with the linked OME-TIFF, then trace how its OME XML metadata is read; done means the TimeIncrement value populates the detected frame interval.

Written by the indexing model from the issue text.

Assessment

Tech stack
java
Domain
computer-vision
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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