Attributed relational graphs for cell segmentation
- Dominant language
- Java
- Stars
- 94
- Forks
- 44
- PR merge metrics
- No merged PRs in 30d
Description
From an [ImageJ forum thread](http://forum.imagej.net/t/cell-nucleus-segmentation/2116):
> There is an interesting procedure to segment clustered nuclei in fluorescence images: http://www.doc.ic.ac.uk/~sa1013/argraphs.html
The source is on GitHub at [sarslancs/argraphs](https://github.com/sarslancs/argraphs).
We could consider doing a language translation of this work to Ops, if anyone has a concrete use case for it.
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by reviewing the linked ImageJ forum discussion and the sarslancs/argraphs source to understand the proposed clustered-nuclei segmentation method. The issue names no target files or tests; progress would require a concrete use case and an agreed scope for translating the work to ImageJ Ops.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- java
- Domain
- computer-vision
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100