imagej / imagej/imagej-common

Add index/label image to ROIs converter

Open
#111 1 comment 3 reactions 0 assignees View on GitHub
Dominant language
Java
Stars
12
Forks
15
PR merge metrics
No merged PRs in 30d

Description

We are in the process of merging this https://github.com/imagej/pyimagej/pull/283 PyImage PR which brings in conversion support for index (_i.e._ label images) to ImgLib2 ROIs (which then can be converted to original ImageJ ROIs if desired). While this is nice for now, these functions really should live as a converter plugin in imagej-common.

Contributor guide

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Research direction

Start by reading PyImageJ PR #283, which contains the index/label-image to ImgLib2 ROI conversion support. Trace how that conversion is represented there, then determine how it can live as a converter plugin in imagej-common; done means the support is available from imagej-common rather than only through PyImageJ.

Written by the indexing model from the issue text.

Assessment

Tech stack
java
Domain
backend
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
38/100

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